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October 1st, 2024: we are pleased to announce the release of our new webservice: FoldScript |
F.A.Q. |
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Q: What do I need to run ENDscript?
ENDscript operates as a webserver. It can be accessed with any Web browser equipped with a PDF reader. To take advantage of the interactive 3D representations, the molecular visualisation program PyMOL is required.
Q: When I submit a job, I cannot find the results anywhere. Clicking on the RESULT button does nothing.
ENDscript uses a pop-up window to display the results. In certain browser configurations, an ad-blocking mechanism prevents this pop-up from appearing. In this case, ENDscript will display a warning message asking the user to specifically disable this security before submitting a job.
To do this, please follow the instructions below, depending on the web browser you are using: In all cases, you must allow the two domains endscript.ibcp.fr and espript.ibcp.fr Once this is done, please restart your Web browser and submit a new job to ENDscript. Q: I have generated an ENDscript flat figure. What do the colors on the multiple sequence alignment mean? Q: In my ENDscript flat figure, which secondary structure element does the symbol "η" refer to?
The η symbol indicates a 310-helix.
α-helices, 310-helices and π-helices are shown as medium, small and large squiggles, respectively. β-strands are shown as arrows, strict β-turns as letters TT and strict α-turns as TTT .Q: How can I manually add any feature to a flat figure generated by ENDscript?
PDF and PostScript files generated by ENDscript can be edited in programs such as Adobe Illustrator or Inkscape.
You can also generate PNG or TIFF files and use the image editing software of your choice. Q: Can I download and install ENDscript on my computer or my server?
Due to software licence restrictions, ENDscript can only be run online from this website.
Q: I have a problem that is not listed here.
Do not hesitate to contact us (espript@ibcp.fr) if you need any further information or if you need some help with ENDscript.
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© 2005-2025 The ENDscript authors & CNRS - Contact: espript@ibcp.fr ESPript is an SBGrid supported application |